[slurm-users] Tuning MaxJobs and MaxJobsSubmit per user and for the whole cluster?
pedmon at cfa.harvard.edu
Mon Aug 10 23:48:10 UTC 2020
Yeah, I imagine that this varies also depending on average length of
job. In our case we do about a job per core per day. So the double the
number of cores works out well for us. However if you have higher turn
over a high number of jobs permitted is wiser.
We have a ton of partitions (130 as of last count) so our tuning has
been a bit more complicated. However the latest version of slurm
(20.02) vastly improved the backfill efficiency which has helped with
making sure the cluster is full. Nonetheless we still seem to average a
job per core per day here.
On 8/10/2020 4:43 PM, Sebastian T Smith wrote:
> My rule of thumb for our cluster is 1,024 jobs/node. Our nodes have
> 32 cores, so we're 32x core count (converting to Paul's units). We
> have 120 nodes with a maximum of 122,880 jobs.
> At a high-level, nodes are allocated to different partitions and each
> partition is allocated a maximum number of jobs equal to 1024 *
> num_nodes (reality isn't quite this simple). Our largest partition
> features 54,272 max jobs (53 nodes). I've seen this maxed out a
> number of times with a large number of very short jobs, and with job
> This setup has required a bit of tuning. Adjusting
> sched_max_job_start and sched_min_interval has been sufficient to keep
> Slurm responsive when users are submitting or cancelling a large
> number of jobs. Backfill tuning has been difficult because we made
> some poor decisions setting DefaultTime at the epoch of our system.
> Overall performance has been excellent after minimal tuning.
> - Sebastian
> University of Nevada, Reno <http://www.unr.edu/>
> *Sebastian Smith
> *High-Performance Computing Engineer
> Office of Information Technology
> 1664 North Virginia Street
> MS 0291
> *work-phone:*775-682-5050 <tel:7756825050>
> ***email:*stsmith at unr.edu <mailto:stsmith at unr.edu>
> *website:*http://rc.unr.edu <http://rc.unr.edu/>
> *From:* slurm-users <slurm-users-bounces at lists.schedmd.com> on behalf
> of Paul Edmon <pedmon at cfa.harvard.edu>
> *Sent:* Friday, August 7, 2020 6:22 AM
> *To:* slurm-users at lists.schedmd.com <slurm-users at lists.schedmd.com>
> *Subject:* Re: [slurm-users] Tuning MaxJobs and MaxJobsSubmit per user
> and for the whole cluster?
> My rule of thumb is that the MaxJobs for the entire cluster is twice
> the number of cores you have available. That way you have enough jobs
> running to fill all the cores and enough jobs pending to refill them.
> As for per user MaxJobs, it just depends on what you think the maximum
> number any user can run with out causing damage to themselves, the
> underlying filesystems, and interfering with other users. Practical
> experience has lead to us setting that limit to be 10,000 on our
> cluster, but I imagine it will vary from location to location.
> -Paul Edmon-
> On 8/6/2020 10:31 PM, Hoyle, Alan P wrote:
>> I can't find any advice online about how to tune things like MaxJobs
>> on a per-cluster or per-user basis.
>> As far as I can tell, it seems that the default install cluster
>> MaxJobs seems to be 10,000 and MaxSubmit as the same. Those seem
>> pretty low to me: are there resources that get consumed if maxSubmit
>> is much higher or can we raise this without much worry?
>> Is there advice anywhere about tuning these? When I google, all I
>> can find are the generic "here's how to change this" and various
>> universities' documentation of "here are the limits we have set."
>> Alan Hoyle - alanh at unc.edu <mailto:alanh at unc.edu>
>> Bioinformatics Scientist
>> UNC Lineberger - Bioinformatics Core
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