[slurm-users] Trouble installing slurm-19.05.1-2.el7.centos.x86_64

Thu Aug 15 14:53:06 UTC 2019

I have tried running ldconfig manually as suggested with
slurm-19.05.1-2 and it fails the same way...
error: Failed dependencies:
        libnvidia-ml.so.1()(64bit) is needed by
slurm-19.05.1-2.el7.centos.x86_64

ldconfig -p shows:
root at panther02 slurm# ldconfig -p|grep libnvidia-ml.
        libnvidia-ml.so.1 (libc6,x86-64) => /usr/lib64/libnvidia-ml.so.1
        libnvidia-ml.so.1 (libc6) => /lib/libnvidia-ml.so.1
        libnvidia-ml.so (libc6,x86-64) => /usr/lib64/libnvidia-ml.so
        libnvidia-ml.so (libc6) => /lib/libnvidia-ml.so

Just tried the latest release slurm-19.05.2 and it fails in the same way...
root at panther02 x86_64# rpm -Uvh slurm-19.05.2-1.el7.centos.x86_64.rpm
error: Failed dependencies:
        libnvidia-ml.so.1()(64bit) is needed by
slurm-19.05.2-1.el7.centos.x86_64

Reinstalled slurm-18.08.8 and it installs with no issues... Just
like slurm-18.08.03 and slurm-18.08.4 did...  All built on the same machine
with rpmbuild -ta command...
root at panther02 slurm-18.08.8# rpm -Uvh slurm-18.08.8-1.el7.centos.x86_64.rpm
Preparing...                          #################################
[100%]
Updating / installing...
   1:slurm-18.08.8-1.el7.centos       #################################
[100%]

Oh, well...

Lou

On Mon, Aug 12, 2019 at 1:32 AM Barbara Krašovec <barbara.krasovec at ijs.si>
wrote:

> What if you try to run ldconfig manually before building the rpm?
>
> Cheers,
>
> Barbara
> On 8/8/19 5:57 PM, Lou Nicotra wrote:
>
> I am running into an error while trying to
> install slurm-19.05.1-2.el7.centos.x86_64... Error is as follows:
> root at panther02 x86_64# rpm -Uvh slurm-19.05.1-2.el7.centos.x86_64.rpm
> error: Failed dependencies:
>         libnvidia-ml.so.1()(64bit) is needed by
> slurm-19.05.1-2.el7.centos.x86_64
>
> Packages are built using rpmbuild... And complete with no errors...
> + cd /root/rpmbuild/BUILD
> + cd slurm-19.05.1-2
> + rm -rf /root/rpmbuild/BUILDROOT/slurm-19.05.1-2.el7.centos.x86_64
> + exit 0
>
> Investigation of the output while building the rpm package shows that
> nvidia-ml is found:
> checking for nvmlInit in -lnvidia-ml... yes
> .
> .
> libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../../../..
> -I../../../../slurm -I../../../.. -I../../../../src/common
> -I/usr/local/cuda/include -I/usr/cuda/include -DNUMA_VERSION1_COMPATIBILITY
> -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
> -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches
> -m64 -mtune=generic -pthread -ggdb3 -Wall -g -O1 -fno-strict-aliasing -c
> gpu_nvml.c  -fPIC -DPIC -o .libs/gpu_nvml.o
> libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I../../../..
> -I../../../../slurm -I../../../.. -I../../../../src/common
> -I/usr/local/cuda/include -I/usr/cuda/include -DNUMA_VERSION1_COMPATIBILITY
> -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions
> -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches
> -m64 -mtune=generic -pthread -ggdb3 -Wall -g -O1 -fno-strict-aliasing -c
> gpu_nvml.c -o gpu_nvml.o >/dev/null 2>&1
> /bin/sh ../../../../libtool  --tag=CC   --mode=link gcc
>  -DNUMA_VERSION1_COMPATIBILITY -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2
> -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4
> -grecord-gcc-switches   -m64 -mtune=generic -pthread -ggdb3 -Wall -g -O1
> -fno-strict-aliasing -module -avoid-version --export-dynamic -Wl,-z,relro
> -o gpu_nvml.la -rpath /usr/lib64/slurm gpu_nvml.lo -lnvidia-ml
> libtool: link: gcc -shared  -fPIC -DPIC  .libs/gpu_nvml.o   -lnvidia-ml  -O2
> -g -fstack-protector-strong -grecord-gcc-switches -m64 -mtune=generic
> -pthread -ggdb3 -g -O1 -Wl,-z -Wl,relro   -pthread -Wl,-soname
> -Wl,gpu_nvml.so -o .libs/gpu_nvml.so
>
> The Makefile in /root/rpmbuild/BUILD/slurm-19.05.1-2/src
> includes: NVML_LIBS = -lnvidia-ml
> but previous releases did not (slurm-18.08.8) And I was able to compile
> and install that release with no issues after building it with rpmbuild...
>
> My LD_LIBRARY_PATH is
> /usr/lib64:/usr/lib:/usr/local/lib64:/usr/local/lib:/var/local/miniconda2/lib/:
>
> Can anyone provide suggestions on working out this issue?
>
> Thanks.
>  --
>
> LOU NICOTRA
>
> IT Systems Engineer - SLT
>
> Interactions LLC
>
> o:  908-673-1833 <781-405-5114>
>
> m: 908-451-6983 <781-405-5114>
>
> *lnicotra at interactions.com <lnicotra at interactions.com>*
> www.interactions.com
>
>
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-- 

LOU NICOTRA

IT Systems Engineer - SLT

Interactions LLC

o:  908-673-1833 <781-405-5114>

m: 908-451-6983 <781-405-5114>

*lnicotra at interactions.com <lnicotra at interactions.com>*
www.interactions.com

-- 

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