[slurm-users] siesta jobs with slurm, an issue

[Mahmood Naderan]

Thanks for the hint. In fact the siesta user wasted my time too!!
:/

Regards,
Mahmood



On Sun, Jul 22, 2018 at 11:13 PM, Renfro, Michael <Renfro at tntech.edu> wrote:

> You’re getting the same fundamental error in both the interactive and
> batch version, though.
>
> The ‘reinit: Reading from standard input’ line seemed off, since you were
> providing an argument for the input file. But all the references I find to
> running Siesta in their manual (section 3 and section 16) show something
> more like:
>
>   mpirun -np 4 /share/apps/chem/siesta-4.0.2/spar/siesta <
> dimer1prime.fdf > dimer1prime.out
>
> and those examples line up with the idea that Siesta reads its commands
> from standard input, not by literally opening an input file specified as a
> command-line argument.
>
> If the version of the command using < and > works correctly, then it’s
> definitely not a Slurm issue, it’s an issue with how you invoked Siesta.
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.schedmd.com/pipermail/slurm-users/attachments/20180723/54c1a14e/attachment.html>