[slurm-users] Unable to locate HDF5 compilation helper scripts 'h5cc' or 'h5pcc'.

[G]

>Date: Sun, 23 Dec 2018 19:45:08 -0800
>From: Kurt H Maier <khm at sciops.net>
>To: Slurm User Community List <slurm-users at lists.schedmd.com>
>Subject: Re: [slurm-users] Unable to locate HDF5 compilation helper
>	scripts 'h5cc' or 'h5pcc'.
>Message-ID: <20181224034508.GA56809 at wopr>
>Content-Type: text/plain; charset=us-ascii
>
>On Mon, Dec 24, 2018 at 11:23:24AM +0800, slurm-users wrote:
>> 
>> It seems doesn't recognize the hdf5, and output the following errors.
>
>
>Possibly related bug:  https://bugs.schedmd.com/show_bug.cgi?id=1990
>
>Without knowing more about how you built HDF5, or more from your slurm
>configure.log, it's going to be tough to help further.  
>
>khm
>

First, I build hdf5 with "CC=mpicc ./configure --prefix=/usr/local/hdf5-1.10.3 --enable-parallel".  And the I build it with "./configure --prefix=/usr/local/hdf5-1.10.3-nompi". 
Both the two way doesn't work.

I have assigned the h5cc file with "--with-hdf5=/usr/local/hdf5-1.10.3-nompi/bin/h5cc", and it works.
The following is output:
checking Using provided HDF5 C wrapper... /usr/local/hdf5-1.10.3-nompi/bin/h5cc
checking for HDF5 type... serial
checking for HDF5 libraries... yes (version 1.10.3)
checking hdf5.h usability... yes
checking hdf5.h presence... yes
checking for hdf5.h... yes
checking for H5Fcreate in -lhdf5... yes
checking for main in -lhdf5_hl... yes
checking for matching HDF5 Fortran wrapper... no








 
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