[slurm-users] "command not found"

david vilanew at gmail.com
Fri Dec 15 04:21:44 MST 2017


Hi,

when running a sbatch script i get "command not found".


The command is blast (quite used bioinformatics tool).


The problem comes from the fact that the blast binary is installed in 
the master nodeĀ  but not on the other nodes. When the job runs on 
another node the binary is not found.


What would be way to deal with this situation ? what is common practice ?


thanks,

david





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