[slurm-users] [EXTERNAL] OpenMPI and Slurm clarification?

[Pritchard Jr., Howard]

HI Craig,

If you run

srun –mpi=list

what does slurm report?

That will help in determining what argument you want to supply for the –mpi srun option.

Howard


From: slurm-users <slurm-users-bounces at lists.schedmd.com> on behalf of Craig <cfreese at super.org>
Reply-To: Slurm User Community List <slurm-users at lists.schedmd.com>
Date: Monday, March 27, 2023 at 12:38 PM
To: "slurm-users at lists.schedmd.com" <slurm-users at lists.schedmd.com>
Subject: [EXTERNAL] [slurm-users] OpenMPI and Slurm clarification?


Can someone please clarify the "best practices" for building OpenMPI compatible with Slurm?

https://slurm.schedmd.com/mpi_guide.html#open_mpi<https://urldefense.com/v3/__https:/slurm.schedmd.com/mpi_guide.html*open_mpi__;Iw!!Bt8fGhp8LhKGRg!Cb86a2IwxgqfT5fv1_eEByDpAyhly3ZdN6Wwl7Wod9FRPx9HBpvFVojIRgu5oSpti_3jOXhNyvJqEMGs$> tells me what I _can_ do but I'm unclear as to what I _should_ do.

I've built OpenMPI 4.1.5 with:   --with-pmix  --with-libevent=internal  --with-hwloc=internal  --with-slurm.  If I run an MPI program on my cluster (slurm 18.08.8) with "srun -N2 foo" it seems to work fine. (slurm.conf has MpiDefault=pmix).

If I "srun --mpi=openmpi -N2 foo" it chokes with:
OPAL_ERROR: Unreachable in file ../../../../../opal/mca/pmix/pmix3/pmix3x_client.c at line 112
-------------------------------------------------------------------------------------------------------------------
This application appears to have been direct launched using "srun",
but OMPI was not build with SLURM's PMI support and therefore cannot
execute.  There are several options for building PMI support under
SLURM, depending upon the SLURM version you are using:

version 16.05 or later: you can use SLURM's PMIx support. THis
require that you configure and uild SLURM --with-pmix.
.
.
.

So I guess the question is, what is the "right" way to build OpenMPI with Slurm.  Is the fact that my non-Slurm pmix works "correct" or am I just getting lucky that the various software I have just happens to be compatible.  If I build OpenMPI am I supposed to use Slurm's pmix/libevent/hwloc or is that optional.  If it's optional when/why might I choose to do so.  If I need Slurm's versions is there some way to find which pmix/libevent/hwloc my current Slurm install is using? Note: my sysadmins are not going to be helpful as they think Slurm 18 and OpenMPI 4.0.2a is adequate for users' needs :^(.

I like the idea of _not_ tying my OpenMPI to the installed Slurm just in case our support people ever decide to upgrade system software.

Thanks.


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