[slurm-users] Multinode blast run

Chris Samuel chris at csamuel.org
Fri Jan 24 15:40:32 UTC 2020

On 24/1/20 3:46 am, Mahmood Naderan wrote:

> Has anyone run blast on multiple nodes via slurm?

I don't think blast is something that can run across nodes (or at least 
it didn't used to be).  There is/was something called "mpiblast" that 
could do that.

If you'll excuse the plug this sounds like a good question for the 
Beowulf list https://www.beowulf.org/ which is a more general purpose 
cluster computing list (disclaimer: I'm the caretaker of it these days).

All the best,
  Chris Samuel  :  http://www.csamuel.org/  :  Berkeley, CA, USA

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