[slurm-users] $TMPDIR does not honor "TmpFS"

Douglas Duckworth dod2014 at med.cornell.edu
Wed Nov 21 06:38:25 MST 2018


Hi

We are setting TmpFS=/scratchLocal in /etc/slurm/slurm.conf on nodes and controller.  However $TMPDIR value seems to be /tmp not /scratchLocal.  As a result users are writing to /tmp which we do not want.

We are not setting $TMPDIR anywhere else such as /etc/profile.d nor do users have it defined in their ~/.bashrc or ~/.bash_profile.

We do not see any error messages anywhere which could indicate why the default value of /tmp overrides our value of of TmpFS.

As I understand prolog scripts can change this value though, if that's the case, then what's the purpose of setting TmpFS in /etc/slurm/slurm.conf?


Thanks,

Douglas Duckworth, MSc, LFCS
HPC System Administrator
Scientific Computing Unit<https://scu.med.cornell.edu>
Weill Cornell Medicine
1300 York Avenue
New York, NY 10065
E: doug at med.cornell.edu<mailto:doug at med.cornell.edu>
O: 212-746-6305
F: 212-746-8690
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