[slurm-users] #SBATCH options as Bash script parameters

[Loris Bennett]

Hi Jessie,

Jessie Poquérusse <jessie.poquerusse at gmail.com> writes:

> Hello, 
>
> In trying to modularize and genericize my Bash scripts as much as
> possible, I was wondering if there was a way to turn #SBATCH options
> (mainly walltime, mem, and output and error file directories) into
> externally defined script parameters (e.g. in the same command line as
> during sbatch job submission).

Maybe I am misunderstanding your question, but isn't

  sbatch --time 01:00:00 --mem=1024M --output=out.txt --error=err.txt

what you want?

Cheers,

Loris

-- 
Dr. Loris Bennett (Mr.)
ZEDAT, Freie Universität Berlin         Email loris.bennett at fu-berlin.de