[slurm-users] Problem launching interactive jobs using srun
Andy Georges
Andy.Georges at UGent.be
Fri Mar 9 10:20:12 MST 2018
Hi,
I am trying to get interactive jobs to work from the machine we use as a login node, i.e., where the users of the cluster log into and from where they typically submit jobs.
I submit the job as follows:
vsc40075 at test2802 (banette) ~> /bin/salloc -N1 -n1 /bin/srun bash -i
salloc: Granted job allocation 41
salloc: Waiting for resource configuration
salloc: Nodes node2801 are ready for job
…
hangs
On node2801, the slurmd log has the following information:
[2018-03-09T18:16:08.820] _run_prolog: run job script took usec=10379
[2018-03-09T18:16:08.820] _run_prolog: prolog with lock for job 41 ran for 0 seconds
[2018-03-09T18:16:08.829] [41.extern] task/cgroup: /slurm/uid_2540075/job_41: alloc=800MB mem.limit=800MB memsw.limit=880MB
[2018-03-09T18:16:08.830] [41.extern] task/cgroup: /slurm/uid_2540075/job_41/step_extern: alloc=800MB mem.limit=800MB memsw.limit=880MB
[2018-03-09T18:16:11.824] launch task 41.0 request from 2540075.2540075 at 10.141.21.202 (port 61928)
[2018-03-09T18:16:11.824] lllp_distribution jobid [41] implicit auto binding: cores,one_thread, dist 1
[2018-03-09T18:16:11.824] _task_layout_lllp_cyclic
[2018-03-09T18:16:11.824] _lllp_generate_cpu_bind jobid [41]: mask_cpu,one_thread, 0x1
[2018-03-09T18:16:11.834] [41.0] task/cgroup: /slurm/uid_2540075/job_41: alloc=800MB mem.limit=800MB memsw.limit=880MB
[2018-03-09T18:16:11.834] [41.0] task/cgroup: /slurm/uid_2540075/job_41/step_0: alloc=800MB mem.limit=800MB memsw.limit=880MB
[2018-03-09T18:16:11.836] [41.0] error: connect io: Connection refused
[2018-03-09T18:16:11.836] [41.0] error: IO setup failed: Connection refused
[2018-03-09T18:16:11.905] [41.0] _oom_event_monitor: oom-kill event count: 1
[2018-03-09T18:16:11.905] [41.0] error: job_manager exiting abnormally, rc = 4021
[2018-03-09T18:16:11.905] [41.0] error: _send_launch_resp: Failed to send RESPONSE_LAUNCH_TASKS: Connection refused
[2018-03-09T18:16:11.907] [41.0] done with job
We are running slurm 17.11.4.
When I change to the same user on both the master node (running slurmctld) and worker nodes (running slurmd), things work just fine. I would assume I need not run slurmd on the login node for this to work?
Any pointers are appreciated,
— Andy
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 228 bytes
Desc: Message signed with OpenPGP
URL: <http://lists.schedmd.com/pipermail/slurm-users/attachments/20180309/1c8e0c97/attachment.sig>
More information about the slurm-users
mailing list