[slurm-users] siesta jobs with slurm, an issue

Mahmood Naderan mahmood.nt at gmail.com
Sun Jul 22 11:36:08 MDT 2018


Yes. Since with my user account, I can not login to nodes, I first ssh to
the node via root and the su there.

[root at rocks7 ~]# ssh compute-0-3
Warning: untrusted X11 forwarding setup failed: xauth key data not generated
Last login: Sun Jul 22 21:40:09 2018 from rocks7.local
Rocks Compute Node
Rocks 7.0 (Manzanita)
Profile built 19:21 11-Apr-2018

Kickstarted 19:37 11-Apr-2018
[root at compute-0-3 ~]# su - mahmood
Last login: Sun Jul 22 21:39:25 +0430 2018 on pts/2
[mahmood at compute-0-3 ~]$ cd sie
[mahmood at compute-0-3 sie]$ cat dimer1prime.fdf
# $Id: sih.fdf,v 1.1 1999/04/20 14:43:44 emilio Exp $
#
-----------------------------------------------------------------------------
# FDF for interstitial H in a cubic c-Si supercell with 64 atoms
#
# E. Artacho, April 1999
#
-----------------------------------------------------------------------------

SystemName          prime
SystemLabel         prime

NumberOfAtoms       168
NumberOfSpecies     5

....
....
....

Regards,
Mahmood



On Sun, Jul 22, 2018 at 9:54 PM, John Hearns <hearnsj at googlemail.com> wrote:

> Are you very sure that the filesystem with the input file is mounted on
> the compute nodes?
> Try to cat the file.
>
>
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