[slurm-users] salloc with bash scripts problem

Ing. Gonzalo E. Arroyo garroyo at ifimar-conicet.gob.ar
Sun Dec 30 07:31:22 MST 2018


$ salloc ....  (Don't call the script in the same line)

I had a typo... srun

El dom., 30 de dic. de 2018 11:29, Ing. Gonzalo E. Arroyo <
garroyo at ifimar-conicet.gob.ar> escribió:

> $ salloc ...
>
> After you have the node you run
>
> $ hostname
>
> $ stun hostname
>
> Check that difference then do the same with script
>
>
> El dom., 30 de dic. de 2018 07:17, Mahmood Naderan <mahmood.nt at gmail.com>
> escribió:
>
>> Hi
>> I have read that salloc has some problem running bash scripts  while it
>> is OK with binary files. The following script works fine from bash
>> terminal, but salloc is unable to to that.
>>
>>
>> $ cat slurm.sh
>> #!/bin/bash
>> ./script.sh files_android.txt report/android.txt
>> $ salloc -n 1 -c 1 --mem=4G -p RUBY -A y4 slurm.sh
>> salloc: Granted job allocation 195
>> salloc: error: Unable to exec command "slurm.sh"
>> salloc: Relinquishing job allocation 195
>> $ ls -l slurm.sh
>> -rwxrwxr-x 1 mahmood mahmood 73 Dec 30 13:24 slurm.sh
>> $ ls -l script.sh
>> -rwxrwxr-x 1 mahmood mahmood 251 Dec 28 00:31 script.sh
>>
>>
>>
>> I have some other scripts and this is going to bother. Any idea? Is there
>> any workaround for that?
>>
>>
>> Regards,
>> Mahmood
>>
>>
>> --
> Ing. Gonzalo Arroyo
>
-- 
Ing. Gonzalo Arroyo
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