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<p class="MsoNormal">Hi,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">We have recently moved to slurm 22.05.8 and have configured job_container/tmpfs to allow private tmp folders.
<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">job_container.conf contains:<o:p></o:p></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">AutoBasePath=true<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">BasePath=/slurm<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco"><o:p> </o:p></span></p>
<p class="MsoNormal">And in slurm.conf we have set<o:p></o:p></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">JobContainerType=job_container/tmpfs<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">I can see the folders being created and they are being used but when a job completes the root folder is not being cleaned up.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Example of running job:<o:p></o:p></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">[root@papr-res-compute204 ~]# ls -al /slurm/14292874<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">total 32<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">drwx------ 3 root root 34 Mar 1 13:16 .<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">drwxr-xr-x 518 root root 16384 Mar 1 13:16 ..<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">drwx------ 2 mzethoven root 6 Mar 1 13:16 .14292874<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">-r--r--r-- 1 root root 0 Mar 1 13:16 .ns<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Example once job completes /slurm/<jobid> remains:<o:p></o:p></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">[root@papr-res-compute204 ~]# ls -al /slurm/14292794<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">total 32<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">drwx------ 2 root root 6 Mar 1 09:33 .<o:p></o:p></span></p>
<p class="MsoNormal"><span style="font-size:9.0pt;font-family:Monaco">drwxr-xr-x 518 root root 16384 Mar 1 13:16 ..<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Is this to be expected or should the folder /slurm/<jobid> also be removed?<o:p></o:p></p>
<p class="MsoNormal">Do I need to create an epilog script to remove the directory that is left?<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Many thanks for the assistance,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Jason<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
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<p class="MsoNormal" style="margin-bottom:12.0pt"><span style="font-size:9.0pt;font-family:Helvetica;color:black;mso-fareast-language:EN-GB">Jason Ellul<br>
Head - Research Computing Facility<br>
Office of Cancer Research<br>
Peter MacCallum Cancer Center</span><o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
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